STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG58757.1Small, acid-soluble spore protein, alpha/beta type. (86 aa)    
Predicted Functional Partners:
SFF67799.1
LysM repeat-containing protein.
  
     0.733
SFG44039.1
Hypothetical protein.
  
     0.718
cotI_3
Spore coat protein I.
  
     0.717
SFG79672.1
MazG-like family protein.
  
     0.704
ssbA_2
Single-stranded DNA-binding protein.
  
     0.691
cotI_1
Spore coat protein, CotS family.
  
     0.682
SFG58413.1
Putative sporulation protein YtxC.
  
    0.674
SFF66314.1
Small, acid-soluble spore protein, alpha/beta type.
  
   
 0.669
cotI_5
Spore coat protein, CotS family.
  
     0.656
SFF97681.1
Putative membrane protein, TIGR04086 family.
  
    0.642
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.