sigV_1 protein (Clostridium homopropionicum)

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Score

sigV_1

RNA polymerase sigma-70 factor, ECF subfamily. (176 aa)

Predicted Functional Partners:

SFG73952.1

0.909

sigW

0.737

rpoC

0.730

rpoB

0.720

SFG83223.1

0.704

SFF75938.1

0.697

cheR2

0.697

rpoA

0.681

rpoZ

0.681

sigM_2

0.630

Your Current Organism:

Clostridium homopropionicum

NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFF75938.1	sigM_2	SAMN04488501_10246	SAMN04488501_10111	Protein of unknown function.	RNA polymerase sigma-70 factor, ECF subfamily.	0.697
SFF75938.1	sigV_1	SAMN04488501_10246	SAMN04488501_11510	Protein of unknown function.	RNA polymerase sigma-70 factor, ECF subfamily.	0.697
SFF75938.1	sigW	SAMN04488501_10246	SAMN04488501_10244	Protein of unknown function.	RNA polymerase sigma-70 factor, ECF subfamily.	0.899
SFG73952.1	sigV_1	SAMN04488501_1159	SAMN04488501_11510	Protein of unknown function.	RNA polymerase sigma-70 factor, ECF subfamily.	0.909
SFG83223.1	sigM_2	SAMN04488501_1193	SAMN04488501_10111	Protein of unknown function.	RNA polymerase sigma-70 factor, ECF subfamily.	0.700
SFG83223.1	sigV_1	SAMN04488501_1193	SAMN04488501_11510	Protein of unknown function.	RNA polymerase sigma-70 factor, ECF subfamily.	0.704
SFG83223.1	sigW	SAMN04488501_1193	SAMN04488501_10244	Protein of unknown function.	RNA polymerase sigma-70 factor, ECF subfamily.	0.704
cheR2	sigM_2	SAMN04488501_10472	SAMN04488501_10111	Chemotaxis protein methyltransferase CheR.	RNA polymerase sigma-70 factor, ECF subfamily.	0.697
cheR2	sigV_1	SAMN04488501_10472	SAMN04488501_11510	Chemotaxis protein methyltransferase CheR.	RNA polymerase sigma-70 factor, ECF subfamily.	0.697
cheR2	sigW	SAMN04488501_10472	SAMN04488501_10244	Chemotaxis protein methyltransferase CheR.	RNA polymerase sigma-70 factor, ECF subfamily.	0.697
rpoA	rpoB	SAMN04488501_10231	SAMN04488501_1328	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	SAMN04488501_10231	SAMN04488501_1329	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoZ	SAMN04488501_10231	SAMN04488501_108112	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
rpoA	sigM_2	SAMN04488501_10231	SAMN04488501_10111	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-70 factor, ECF subfamily.	0.681
rpoA	sigV_1	SAMN04488501_10231	SAMN04488501_11510	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-70 factor, ECF subfamily.	0.681
rpoA	sigW	SAMN04488501_10231	SAMN04488501_10244	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-70 factor, ECF subfamily.	0.681
rpoB	rpoA	SAMN04488501_1328	SAMN04488501_10231	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	SAMN04488501_1328	SAMN04488501_1329	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoZ	SAMN04488501_1328	SAMN04488501_108112	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
rpoB	sigM_2	SAMN04488501_1328	SAMN04488501_10111	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-70 factor, ECF subfamily.	0.720