STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuC_5ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. (254 aa)    
Predicted Functional Partners:
SFG76627.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
 
 0.996
tauB_1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 0.996
SFG76573.1
Uncharacterized protein, MTH1187 family.
 
    0.974
ssuB_1
NitT/TauT family transport system ATP-binding protein.
 
 0.916
SFG86616.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.907
tauB_2
NitT/TauT family transport system ATP-binding protein.
 
 0.902
ssuB_2
NitT/TauT family transport system ATP-binding protein.
 
 0.850
ssuB_3
NitT/TauT family transport system ATP-binding protein.
 
 0.840
ssuA
NitT/TauT family transport system substrate-binding protein.
 
 
 0.777
ssuC_2
NitT/TauT family transport system permease protein.
  
  
 
0.727
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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