Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG81617.1 | SFG81655.1 | SAMN04488501_11825 | SAMN04488501_11826 | Hypothetical protein. | Hypothetical protein. | 0.686 |
SFG81617.1 | SFG81688.1 | SAMN04488501_11825 | SAMN04488501_11827 | Hypothetical protein. | G/U mismatch-specific uracil-DNA glycosylase. | 0.600 |
SFG81655.1 | SFG81617.1 | SAMN04488501_11826 | SAMN04488501_11825 | Hypothetical protein. | Hypothetical protein. | 0.686 |
SFG81655.1 | SFG81688.1 | SAMN04488501_11826 | SAMN04488501_11827 | Hypothetical protein. | G/U mismatch-specific uracil-DNA glycosylase. | 0.675 |
SFG81688.1 | SFG81617.1 | SAMN04488501_11827 | SAMN04488501_11825 | G/U mismatch-specific uracil-DNA glycosylase. | Hypothetical protein. | 0.600 |
SFG81688.1 | SFG81655.1 | SAMN04488501_11827 | SAMN04488501_11826 | G/U mismatch-specific uracil-DNA glycosylase. | Hypothetical protein. | 0.675 |
SFG81688.1 | arsC | SAMN04488501_11827 | SAMN04488501_102109 | G/U mismatch-specific uracil-DNA glycosylase. | Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.677 |
SFG81688.1 | exoA | SAMN04488501_11827 | SAMN04488501_11111 | G/U mismatch-specific uracil-DNA glycosylase. | Exodeoxyribonuclease-3. | 0.872 |
SFG81688.1 | guaA | SAMN04488501_11827 | SAMN04488501_101295 | G/U mismatch-specific uracil-DNA glycosylase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.416 |
SFG81688.1 | ogt | SAMN04488501_11827 | SAMN04488501_101430 | G/U mismatch-specific uracil-DNA glycosylase. | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.666 |
SFG81688.1 | purN | SAMN04488501_11827 | SAMN04488501_10762 | G/U mismatch-specific uracil-DNA glycosylase. | Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.481 |
arsC | SFG81688.1 | SAMN04488501_102109 | SAMN04488501_11827 | Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | G/U mismatch-specific uracil-DNA glycosylase. | 0.677 |
exoA | SFG81688.1 | SAMN04488501_11111 | SAMN04488501_11827 | Exodeoxyribonuclease-3. | G/U mismatch-specific uracil-DNA glycosylase. | 0.872 |
guaA | SFG81688.1 | SAMN04488501_101295 | SAMN04488501_11827 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | G/U mismatch-specific uracil-DNA glycosylase. | 0.416 |
guaA | purN | SAMN04488501_101295 | SAMN04488501_10762 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.745 |
ogt | SFG81688.1 | SAMN04488501_101430 | SAMN04488501_11827 | methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | G/U mismatch-specific uracil-DNA glycosylase. | 0.666 |
purN | SFG81688.1 | SAMN04488501_10762 | SAMN04488501_11827 | Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | G/U mismatch-specific uracil-DNA glycosylase. | 0.481 |
purN | guaA | SAMN04488501_10762 | SAMN04488501_101295 | Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.745 |