tnsB_2 protein (Clostridium homopropionicum)

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

tnsB_2

Mu transposase, C-terminal. (720 aa)

Predicted Functional Partners:

tnsC_2

0.986

tnsA_2

0.965

SFG82336.1

0.949

tnsC_1

0.943

tnsA_1

0.791

SFF76528.1

0.786

SFG80923.1

0.751

SFG80893.1

0.746

SFG41815.1

0.735

dnaG_2

0.716

Your Current Organism:

Clostridium homopropionicum

NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFF76528.1	SFG80893.1	SAMN04488501_10275	SAMN04488501_1185	TniQ protein.	Four helix bundle protein.	0.686
SFF76528.1	SFG80923.1	SAMN04488501_10275	SAMN04488501_1186	TniQ protein.	Plasmid segregation actin-type ATPase ParM.	0.750
SFF76528.1	dnaG_2	SAMN04488501_10275	SAMN04488501_11811	TniQ protein.	DNA primase.	0.663
SFF76528.1	tnsA_1	SAMN04488501_10275	SAMN04488501_10272	TniQ protein.	TnsA endonuclease C terminal.	0.924
SFF76528.1	tnsA_2	SAMN04488501_10275	SAMN04488501_11843	TniQ protein.	TnsA endonuclease N terminal.	0.809
SFF76528.1	tnsB_2	SAMN04488501_10275	SAMN04488501_11844	TniQ protein.	Mu transposase, C-terminal.	0.786
SFF76528.1	tnsC_1	SAMN04488501_10275	SAMN04488501_10274	TniQ protein.	AAA domain-containing protein.	0.929
SFF76528.1	tnsC_2	SAMN04488501_10275	SAMN04488501_11845	TniQ protein.	AAA domain-containing protein.	0.787
SFG41815.1	tnsB_2	SAMN04488501_1093	SAMN04488501_11844	Putative transposase.	Mu transposase, C-terminal.	0.735
SFG41815.1	tnsC_1	SAMN04488501_1093	SAMN04488501_10274	Putative transposase.	AAA domain-containing protein.	0.794
SFG41815.1	tnsC_2	SAMN04488501_1093	SAMN04488501_11845	Putative transposase.	AAA domain-containing protein.	0.794
SFG80893.1	SFF76528.1	SAMN04488501_1185	SAMN04488501_10275	Four helix bundle protein.	TniQ protein.	0.686
SFG80893.1	SFG80923.1	SAMN04488501_1185	SAMN04488501_1186	Four helix bundle protein.	Plasmid segregation actin-type ATPase ParM.	0.625
SFG80893.1	SFG82336.1	SAMN04488501_1185	SAMN04488501_11846	Four helix bundle protein.	TniQ protein.	0.683
SFG80893.1	dnaG_2	SAMN04488501_1185	SAMN04488501_11811	Four helix bundle protein.	DNA primase.	0.556
SFG80893.1	tnsA_1	SAMN04488501_1185	SAMN04488501_10272	Four helix bundle protein.	TnsA endonuclease C terminal.	0.707
SFG80893.1	tnsA_2	SAMN04488501_1185	SAMN04488501_11843	Four helix bundle protein.	TnsA endonuclease N terminal.	0.744
SFG80893.1	tnsB_2	SAMN04488501_1185	SAMN04488501_11844	Four helix bundle protein.	Mu transposase, C-terminal.	0.746
SFG80893.1	tnsC_1	SAMN04488501_1185	SAMN04488501_10274	Four helix bundle protein.	AAA domain-containing protein.	0.716
SFG80893.1	tnsC_2	SAMN04488501_1185	SAMN04488501_11845	Four helix bundle protein.	AAA domain-containing protein.	0.745