STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG86143.1Energy-coupling factor transport system substrate-specific component. (265 aa)    
Predicted Functional Partners:
SFG86119.1
EamA-like transporter family protein.
 
     0.809
SFG86089.1
Protein of unknown function.
       0.779
hlyB
NHLM bacteriocin system ABC transporter, ATP-binding protein.
       0.518
SFG86056.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
       0.518
lagD_1
NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein.
       0.505
SFG44246.1
Putative component of 'biosynthetic module'.
  
     0.488
SFG85966.1
HlyD family secretion protein.
       0.481
ispU
Undecaprenyl diphosphate synthase.
  
 
 0.458
luxQ_1
Predicted ATPase.
 
  
 0.453
pucR
PucR C-terminal helix-turn-helix domain-containing protein.
       0.421
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
Server load: low (22%) [HD]