STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG89455.1Uncharacterized membrane protein. (360 aa)    
Predicted Functional Partners:
SFG89481.1
Uncharacterized membrane-anchored protein.
 
     0.957
SFG89429.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
 
     0.851
SFG89403.1
Hypothetical protein.
       0.723
mepA_5
Putative efflux protein, MATE family.
       0.515
SFF66963.1
Hypothetical protein.
  
     0.461
SFG57706.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.