STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG92800.1Type I restriction modification DNA specificity domain-containing protein. (226 aa)    
Predicted Functional Partners:
SFG81382.1
Type I restriction enzyme M protein.
 
 
 0.994
paeR7IM
Adenine-specific DNA-methyltransferase.
  
 
 0.903
SFG39462.1
Hypothetical protein.
  
 
 0.903
SFG54879.1
Hypothetical protein.
  
 
 0.903
hsdR_2
Type I restriction enzyme, R subunit.
 
 
 0.900
hsdR_1
Type I restriction enzyme, R subunit.
 
  
 0.890
atpF
F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.712
SFG16342.1
Predicted ATP-dependent endonuclease of the OLD family, contains P-loop ATPase and TOPRIM domains.
 
  
 0.708
SFG92822.1
Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family.
 
     0.672
polA_2
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 
 0.647
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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