STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kce3-keto-5-aminohexanoate cleavage enzyme. (272 aa)    
Predicted Functional Partners:
mmgB_5
3-hydroxybutyryl-CoA dehydrogenase.
  
  
 0.790
SFG96484.1
acyl-CoA thioester hydrolase.
 
 
 0.716
SFG46435.1
butyryl-CoA:acetoacetate CoA-transferase alpha subunit.
    
 0.668
SFG76399.1
butyryl-CoA:acetoacetate CoA-transferase alpha subunit.
    
 0.668
atoD_1
butyryl-CoA:acetoacetate CoA-transferase alpha subunit.
    
 0.668
kynB
Kynurenine formamidase.
  
    0.657
kamA
L-lysine 2,3-aminomutase.
 
   
 0.605
SFG96355.1
Coenzyme A transferase.
    
 0.593
atoE_2
Short-chain fatty acids transporter.
 
     0.593
ctfA
Acetate CoA/acetoacetate CoA-transferase alpha subunit.
    
 0.524
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.