STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG98772.1Hypothetical protein. (426 aa)    
Predicted Functional Partners:
SFG94725.1
Protein of unknown function.
  
  
 0.862
SFG54732.1
ATP-dependent Lon protease.
 
  
 0.859
SFG00986.1
NFACT-R_1 domain-containing protein; Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.
  
  
 0.842
SFG98750.1
Hypothetical protein.
       0.773
SFG45635.1
Hypothetical protein.
  
    0.610
SFG16279.1
Hypothetical protein.
  
    0.609
SFG39462.1
Hypothetical protein.
 
    0.584
SFG54879.1
Hypothetical protein.
 
    0.535
paeR7IM
Adenine-specific DNA-methyltransferase.
 
    0.529
iolB
5-deoxyglucuronate isomerase.
   
    0.527
Your Current Organism:
Clostridium homopropionicum
NCBI taxonomy Id: 36844
Other names: ATCC 51426, C. homopropionicum, DSM 5847, strain LuHBu1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.