STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltDGlutamate synthase [NADPH] small chain. (463 aa)    
Predicted Functional Partners:
pyrK_1
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit.
 0.999
gltB_2
Ferredoxin-dependent glutamate synthase 1.
 
 0.997
rsxB_1
Electron transport complex subunit RsxB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 
 0.992
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.
 0.988
pyrD
Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
 
 0.950
nifJ_3
Pyruvate-flavodoxin oxidoreductase.
 
 
 0.938
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
 
 
 0.937
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
 
 
 0.937
nifJ_4
Pyruvate-flavodoxin oxidoreductase.
 
 
 0.937
KXL53171.1
Hypothetical protein; Conserved region in glutamate synthase.
  
 0.912
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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