STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXL53969.1PEGA domain protein. (474 aa)    
Predicted Functional Partners:
pgcA
Phosphoglucomutase.
       0.753
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.680
KXL51700.1
Hypothetical protein.
  
     0.640
ycf3_2
Photosystem I assembly protein Ycf3.
 
     0.625
KXL52021.1
Hypothetical protein.
  
     0.621
KXL52041.1
Hypothetical protein.
  
     0.601
lytB_4
Amidase enhancer precursor.
  
     0.585
KXL53210.1
Subtilase family protein.
  
     0.561
KXL53209.1
Subtilase family protein.
  
     0.533
KXL51650.1
LysM domain/BON superfamily protein.
  
     0.532
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.