STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aprX_1Serine protease AprX. (74 aa)    
Predicted Functional Partners:
aprX_2
Serine protease AprX.
  
     0.700
KXL53927.1
spore_YabQ.
  
     0.599
ssbA_2
Single-stranded DNA-binding protein A.
  
     0.599
KXL53418.1
Stage V sporulation protein AA.
  
     0.556
KXL54021.1
Hypothetical protein.
       0.536
KXL54022.1
Hypothetical protein.
       0.536
KXL53417.1
Hypothetical protein.
  
     0.534
spoIIIAE
Stage III sporulation protein AE precursor.
  
     0.525
lytN
Putative cell wall hydrolase LytN precursor.
  
  
  0.495
KXL53044.1
Stage III sporulation protein AC/AD protein family protein.
  
     0.464
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.