STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
penAPenicillin-binding protein 2B. (945 aa)    
Predicted Functional Partners:
mreC
Cell shape-determining protein MreC precursor; Involved in formation and maintenance of cell shape.
 
 
 0.970
ftsW_1
Lipid II flippase FtsW; Belongs to the SEDS family.
 
 0.940
mreB_1
Rod shape-determining protein MreB.
 
 
 0.907
spoVD_1
Stage V sporulation protein D.
  
  
0.870
divIB
Cell division protein DivIB.
 
 
 0.864
pbpA
Penicillin-binding protein A.
  
  
0.862
minC
Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
  
  
 0.848
mreB_2
Rod shape-determining protein MreB.
 
 
 0.848
KXL54050.1
Rod shape-determining protein MreD.
 
  
 0.826
spoVD_2
Stage V sporulation protein D.
 
  
0.807
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.