STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloB_1Hydroxyacylglutathione hydrolase. (347 aa)    
Predicted Functional Partners:
cdr_1
Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
 0.958
cdr_2
Coenzyme A disulfide reductase.
  
 0.769
ldhA
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.692
KXL54097.1
Helix-turn-helix protein.
  
    0.514
abfD
4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-delta-isomerase.
  
     0.485
rpsA
30S ribosomal protein S1.
       0.441
fldB
R-phenyllactate dehydratase subunit alpha precursor.
  
     0.408
KXL51742.1
TDP-fucosamine acetyltransferase.
  
  
  0.406
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.