Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lutR_1HTH-type transcriptional regulator LutR. (239 aa)    
Predicted Functional Partners:
lldR_2
Putative L-lactate dehydrogenase operon regulatory protein.
  
    0.775
glcC
Glc operon transcriptional activator.
  
     0.774
mcbR_2
HTH-type transcriptional regulator McbR.
  
    0.774
KXL54027.1
DNA-binding transcriptional regulator CsiR.
  
    0.772
mcbR_1
HTH-type transcriptional regulator McbR.
  
    0.771
KXL53010.1
DNA-binding transcriptional regulator CsiR.
  
    0.764
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
  
 0.492
lutP
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.466
kdgR
Transcriptional regulator KdgR.
  
  
 0.432
KXL54222.1
Hypothetical protein.
  
    0.411
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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