Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXL54239.1Potassium transporter peripheral membrane component. (216 aa)    
Predicted Functional Partners:
ldhA
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
  0.637
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
    
 0.631
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
    
 0.631
nifJ_3
Pyruvate-flavodoxin oxidoreductase.
    
 0.631
nifJ_4
Pyruvate-flavodoxin oxidoreductase.
    
 0.631
opuBA_1
Choline transport ATP-binding protein OpuBA.
 
     0.626
opuBC_1
Choline-binding protein precursor.
 
     0.559
pdhD
Dihydrolipoyl dehydrogenase.
  
  
 0.538
opuCB_2
Glycine betaine/carnitine/choline transport system permease protein OpuCB.
       0.490
opuCB_1
Carnitine transport permease protein OpuCB.
       0.488
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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