STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXL54423.1Endodeoxyribonuclease RusA. (135 aa)    
Predicted Functional Partners:
KXL54424.1
Hypothetical protein.
 
    0.817
KXL54419.1
Hypothetical protein; Siphovirus Gp157.
 
     0.812
KXL54422.1
Hypothetical protein.
       0.774
KXL54420.1
Hypothetical protein.
       0.768
KXL54421.1
Hypothetical protein.
       0.768
KXL54417.1
Hypothetical protein.
       0.741
KXL54418.1
Hypothetical protein.
       0.741
KXL54416.1
Putative PPE family protein PPE42.
       0.715
KXL54415.1
Hypothetical protein.
       0.596
KXL53494.1
Terminase-like family protein.
 
     0.567
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.