Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXL53502.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
KXL53503.1
Hypothetical protein.
       0.818
KXL53499.1
Hypothetical protein.
       0.817
KXL53501.1
Hypothetical protein.
       0.817
KXL53500.1
Hypothetical protein.
       0.773
KXL53505.1
Bacteriophage Gp15 protein.
       0.752
KXL53498.1
Hypothetical protein.
       0.723
KXL53496.1
Hypothetical protein.
       0.715
KXL53497.1
Hypothetical protein.
       0.700
KXL53504.1
Hypothetical protein.
       0.689
KXL53507.1
Phage tail protein.
       0.630
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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