STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amtBAmmonia channel precursor; Belongs to the P(II) protein family. (581 aa)    
Predicted Functional Partners:
glnB_2
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.974
glnB_1
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.972
rpfG_2
Cyclic di-GMP phosphodiesterase response regulator RpfG.
    
 0.965
barA
Signal transduction histidine-protein kinase BarA.
 
 0.963
cph2_4
Phytochrome-like protein cph2.
   
 0.934
cph2_2
Phytochrome-like protein cph2.
  
 0.931
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.925
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
 
 
 
 0.910
ycf3_1
Photosystem I assembly protein Ycf3.
    
 
 0.890
nifB
FeMo cofactor biosynthesis protein NifB.
  
 
 0.884
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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