STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srp54Signal recognition particle 54 kDa protein. (270 aa)    
Predicted Functional Partners:
KXL53578.1
Hypothetical protein.
 
   
 0.951
KXL53579.1
Hypothetical protein.
 
  
 0.950
KXL53575.1
SAF domain protein.
 
    0.949
KXL53577.1
Type IV secretion system protein VirB11.
 
     0.948
KXL53580.1
Hypothetical protein.
 
     0.944
KXL53574.1
Type IV leader peptidase family protein.
 
     0.895
KXL53583.1
Hypothetical protein.
 
     0.863
cheY_1
Chemotaxis protein CheY.
  
 0.846
ancA_1
Cellulosome-anchoring protein precursor.
 
    0.837
cph2_2
Phytochrome-like protein cph2.
  
 
 0.827
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.