STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXL53582.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
KXL53583.1
Hypothetical protein.
       0.600
KXL53581.1
Hypothetical protein.
       0.549
KXL53580.1
Hypothetical protein.
       0.545
KXL53584.1
Hypothetical protein.
       0.535
KXL53579.1
Hypothetical protein.
       0.532
KXL53578.1
Hypothetical protein.
       0.531
KXL53575.1
SAF domain protein.
       0.530
srp54
Signal recognition particle 54 kDa protein.
       0.528
KXL53577.1
Type IV secretion system protein VirB11.
       0.526
KXL53585.1
Hypothetical protein.
       0.419
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.