STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXL53618.1Hypothetical protein. (193 aa)    
Predicted Functional Partners:
KXL53617.1
Hypothetical protein.
 
     0.875
KXL53616.1
Hypothetical protein.
 
     0.856
KXL53845.1
Transcriptional repressor DicA.
 
     0.718
KXL53564.1
Antirestriction protein (ArdA).
  
     0.703
KXL53799.1
Type IV leader peptidase family protein.
  
     0.686
KXL53600.1
Hypothetical protein.
  
     0.677
KXL53787.1
Antirestriction protein (ArdA).
  
     0.673
KXL53836.1
Hypothetical protein.
  
     0.645
KXL53854.1
Hypothetical protein.
  
     0.632
KXL53808.1
Hypothetical protein.
  
     0.627
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.