STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parB_2Putative chromosome-partitioning protein ParB; Belongs to the ParB family. (307 aa)    
Predicted Functional Partners:
soj_3
Sporulation initiation inhibitor protein Soj.
 
   0.974
soj_1
Sporulation initiation inhibitor protein Soj.
 
   0.859
soj_2
Sporulation initiation inhibitor protein Soj.
 
   0.847
KXL53626.1
Replication initiator protein A (RepA) N-terminus.
 
     0.833
KXL53628.1
Hypothetical protein.
 
     0.766
KXL53629.1
Type IV secretory system conjugative DNA transfer.
  
     0.716
KXL53684.1
Hypothetical protein.
 
    0.708
KXL53686.1
Relaxase/mobilization nuclease domain protein.
 
    0.704
KXL53673.1
AAA-like domain protein.
  
     0.682
KXL53669.1
Hypothetical protein.
  
     0.660
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.