Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXL53671.1Hypothetical protein. (266 aa)    
Predicted Functional Partners:
KXL53672.1
PrgI family protein.
 
     0.899
iap_1
Putative endopeptidase p60 precursor.
 
     0.858
KXL53673.1
AAA-like domain protein.
 
     0.830
KXL53669.1
Hypothetical protein.
 
     0.806
KXL53670.1
Hypothetical protein.
       0.773
KXL53677.1
Hypothetical protein.
 
     0.708
KXL53854.1
Hypothetical protein.
 
     0.684
KXL53836.1
Hypothetical protein.
 
     0.680
KXL52239.1
Hypothetical protein.
  
    0.671
KXL53628.1
Hypothetical protein.
  
     0.646
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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