STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXL53673.1AAA-like domain protein. (792 aa)    
Predicted Functional Partners:
KXL53672.1
PrgI family protein.
     0.969
iap_1
Putative endopeptidase p60 precursor.
    0.953
KXL53669.1
Hypothetical protein.
 
   
 0.935
KXL53677.1
Hypothetical protein.
 
     0.853
KXL53671.1
Hypothetical protein.
 
     0.830
KXL53684.1
Hypothetical protein.
 
     0.808
topB_1
DNA topoisomerase 3.
 
  
 0.805
KXL53629.1
Type IV secretory system conjugative DNA transfer.
 
  
 0.789
KXL53651.1
TraM recognition site of TraD and TraG.
 
  
 0.789
KXL53652.1
Maff2 family protein.
 
     0.781
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.