Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXL53677.1Hypothetical protein. (218 aa)    
Predicted Functional Partners:
topB_1
DNA topoisomerase 3.
 
     0.921
KXL53672.1
PrgI family protein.
 
     0.879
iap_1
Putative endopeptidase p60 precursor.
 
     0.879
KXL53669.1
Hypothetical protein.
 
     0.867
KXL53673.1
AAA-like domain protein.
 
     0.851
KXL53676.1
Hypothetical protein.
       0.802
KXL53652.1
Maff2 family protein.
 
     0.787
KXL53628.1
Hypothetical protein.
 
     0.781
KXL53629.1
Type IV secretory system conjugative DNA transfer.
  
     0.774
KXL53651.1
TraM recognition site of TraD and TraG.
  
     0.774
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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