STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXL53887.1Hypothetical protein. (341 aa)    
Predicted Functional Partners:
KXL53888.1
Hypothetical protein.
       0.773
KXL53889.1
Hypothetical protein.
       0.773
recD2_1
ATP-dependent RecD-like DNA helicase.
 
     0.495
dgt_2
Deoxyguanosinetriphosphate triphosphohydrolase.
       0.476
rapA
RNA polymerase-associated protein RapA.
       0.444
KXL53884.1
DNA methylase.
       0.430
recF_2
DNA replication and repair protein RecF.
       0.430
addA_2
ATP-dependent helicase/nuclease subunit A.
       0.405
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.