Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KXL52450.1 | KXL53183.1 | CLNEO_21460 | CLNEO_11540 | S4 domain protein. | Histidinol-phosphate aminotransferase. | 0.454 |
| KXL52450.1 | sepF | CLNEO_21460 | CLNEO_21440 | S4 domain protein. | Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.929 |
| KXL53181.1 | KXL53183.1 | CLNEO_11520 | CLNEO_11540 | DegV domain-containing protein. | Histidinol-phosphate aminotransferase. | 0.527 |
| KXL53181.1 | topB_2 | CLNEO_11520 | CLNEO_11530 | DegV domain-containing protein. | DNA topoisomerase 3. | 0.527 |
| KXL53183.1 | KXL52450.1 | CLNEO_11540 | CLNEO_21460 | Histidinol-phosphate aminotransferase. | S4 domain protein. | 0.454 |
| KXL53183.1 | KXL53181.1 | CLNEO_11540 | CLNEO_11520 | Histidinol-phosphate aminotransferase. | DegV domain-containing protein. | 0.527 |
| KXL53183.1 | cggR | CLNEO_11540 | CLNEO_19370 | Histidinol-phosphate aminotransferase. | Central glycolytic regulator protein. | 0.558 |
| KXL53183.1 | ddl | CLNEO_11540 | CLNEO_01850 | Histidinol-phosphate aminotransferase. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.747 |
| KXL53183.1 | hflX | CLNEO_11540 | CLNEO_19450 | Histidinol-phosphate aminotransferase. | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.465 |
| KXL53183.1 | miaA | CLNEO_11540 | CLNEO_11500 | Histidinol-phosphate aminotransferase. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.548 |
| KXL53183.1 | sepF | CLNEO_11540 | CLNEO_21440 | Histidinol-phosphate aminotransferase. | Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.564 |
| KXL53183.1 | speA_1 | CLNEO_11540 | CLNEO_03440 | Histidinol-phosphate aminotransferase. | Arginine decarboxylase. | 0.605 |
| KXL53183.1 | speA_2 | CLNEO_11540 | CLNEO_04730 | Histidinol-phosphate aminotransferase. | Arginine decarboxylase. | 0.605 |
| KXL53183.1 | topB_2 | CLNEO_11540 | CLNEO_11530 | Histidinol-phosphate aminotransferase. | DNA topoisomerase 3. | 0.773 |
| cggR | KXL53183.1 | CLNEO_19370 | CLNEO_11540 | Central glycolytic regulator protein. | Histidinol-phosphate aminotransferase. | 0.558 |
| ddl | KXL53183.1 | CLNEO_01850 | CLNEO_11540 | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Histidinol-phosphate aminotransferase. | 0.747 |
| hflX | KXL53183.1 | CLNEO_19450 | CLNEO_11540 | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Histidinol-phosphate aminotransferase. | 0.465 |
| hflX | miaA | CLNEO_19450 | CLNEO_11500 | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.713 |
| miaA | KXL53183.1 | CLNEO_11500 | CLNEO_11540 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | Histidinol-phosphate aminotransferase. | 0.548 |
| miaA | hflX | CLNEO_11500 | CLNEO_19450 | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.713 |
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