STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpBNa(+)/H(+) antiporter subunit B. (301 aa)    
Predicted Functional Partners:
mrpC
Na(+)/H(+) antiporter subunit C.
 
 0.999
mrpG
Na(+)/H(+) antiporter subunit G.
 
 
 0.997
mnhE1
Na(+)/H(+) antiporter subunit E1.
 
 
 0.997
mrpD
Na(+)/H(+) antiporter subunit D.
 
 
 0.996
KXL53328.1
Putative monovalent cation/H+ antiporter subunit F.
 
 
 0.996
hyfB_2
Hydrogenase-4 component B.
 
 
 0.992
hyfB_1
Hydrogenase-4 component B.
 
 
 0.991
mrpA
Na(+)/H(+) antiporter subunit A.
 
 
 0.991
KXL53326.1
Putative monovalent cation/H+ antiporter subunit B.
 
 
 
 0.982
rsxB_1
Electron transport complex subunit RsxB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.789
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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