STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXL52921.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
KXL53793.1
Hypothetical protein.
  
     0.689
KXL53787.1
Antirestriction protein (ArdA).
  
     0.654
malT_1
HTH-type transcriptional regulator MalT.
  
     0.608
malT_2
HTH-type transcriptional regulator MalT.
  
     0.608
KXL52920.1
Hypothetical protein.
       0.543
KXL53671.1
Hypothetical protein.
  
     0.537
banIM_2
Modification methylase BanI.
  
    0.433
KXL51953.1
TSCPD domain protein.
  
     0.403
dnaG_4
DNA primase.
  
    0.402
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.