STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXL52944.1Hypothetical protein. (324 aa)    
Predicted Functional Partners:
KXL52947.1
Hypothetical protein; Resolvase, N terminal domain.
 
    0.945
KXL52948.1
Hypothetical protein.
 
    0.937
KXL52946.1
Hypothetical protein.
  
    0.834
KXL52943.1
Hypothetical protein.
       0.829
KXL52945.1
Hypothetical protein.
       0.829
KXL52949.1
Hypothetical protein.
       0.774
KXL53901.1
Type III restriction enzyme, res subunit.
  
    0.767
KXL52918.1
Type III restriction enzyme, res subunit.
  
    0.767
KXL52950.1
Anaerobic benzoate catabolism transcriptional regulator.
 
     0.540
bchN
Light-independent protochlorophyllide reductase subunit N.
  
     0.465
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.