STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yicL_1Putative inner membrane transporter YicL. (305 aa)    
Predicted Functional Partners:
KXL52990.1
Arylmalonate decarboxylase.
       0.773
ectA
L-2,4-diaminobutyric acid acetyltransferase.
       0.737
yicL_2
Putative inner membrane transporter YicL.
  
     0.678
teaA
Ectoine-binding periplasmic protein TeaA precursor.
       0.527
teaC
Ectoine TRAP transporter large permease protein TeaC.
  
    0.509
teaB_1
Ectoine TRAP transporter small permease protein TeaB.
       0.498
KXL52992.1
Hypothetical protein.
       0.432
doeA
Ectoine hydrolase.
    
  0.419
ydfK
Putative membrane protein YdfK.
  
     0.410
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.