node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
arcB_1 | arcB_2 | CLNEO_17070 | CLNEO_27870 | Aerobic respiration control sensor protein ArcB. | Aerobic respiration control sensor protein ArcB. | 0.987 |
arcB_1 | barA | CLNEO_17070 | CLNEO_28430 | Aerobic respiration control sensor protein ArcB. | Signal transduction histidine-protein kinase BarA. | 0.999 |
arcB_1 | luxS | CLNEO_17070 | CLNEO_16140 | Aerobic respiration control sensor protein ArcB. | S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.792 |
arcB_1 | tdcB | CLNEO_17070 | CLNEO_20890 | Aerobic respiration control sensor protein ArcB. | L-threonine dehydratase catabolic TdcB; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.663 |
arcB_2 | arcB_1 | CLNEO_27870 | CLNEO_17070 | Aerobic respiration control sensor protein ArcB. | Aerobic respiration control sensor protein ArcB. | 0.987 |
arcB_2 | barA | CLNEO_27870 | CLNEO_28430 | Aerobic respiration control sensor protein ArcB. | Signal transduction histidine-protein kinase BarA. | 0.999 |
arcB_2 | luxS | CLNEO_27870 | CLNEO_16140 | Aerobic respiration control sensor protein ArcB. | S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.791 |
arcB_2 | tdcB | CLNEO_27870 | CLNEO_20890 | Aerobic respiration control sensor protein ArcB. | L-threonine dehydratase catabolic TdcB; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.654 |
barA | arcB_1 | CLNEO_28430 | CLNEO_17070 | Signal transduction histidine-protein kinase BarA. | Aerobic respiration control sensor protein ArcB. | 0.999 |
barA | arcB_2 | CLNEO_28430 | CLNEO_27870 | Signal transduction histidine-protein kinase BarA. | Aerobic respiration control sensor protein ArcB. | 0.999 |
barA | cysK1_1 | CLNEO_28430 | CLNEO_25770 | Signal transduction histidine-protein kinase BarA. | O-acetylserine sulfhydrylase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.515 |
barA | cysK1_2 | CLNEO_28430 | CLNEO_29690 | Signal transduction histidine-protein kinase BarA. | O-acetylserine sulfhydrylase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.515 |
barA | luxS | CLNEO_28430 | CLNEO_16140 | Signal transduction histidine-protein kinase BarA. | S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.867 |
barA | tdcB | CLNEO_28430 | CLNEO_20890 | Signal transduction histidine-protein kinase BarA. | L-threonine dehydratase catabolic TdcB; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.705 |
cysK1_1 | barA | CLNEO_25770 | CLNEO_28430 | O-acetylserine sulfhydrylase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Signal transduction histidine-protein kinase BarA. | 0.515 |
cysK1_1 | hom | CLNEO_25770 | CLNEO_17010 | O-acetylserine sulfhydrylase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Homoserine dehydrogenase. | 0.434 |
cysK1_1 | luxS | CLNEO_25770 | CLNEO_16140 | O-acetylserine sulfhydrylase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.791 |
cysK1_1 | mdeA_1 | CLNEO_25770 | CLNEO_11940 | O-acetylserine sulfhydrylase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Methionine gamma-lyase. | 0.789 |
cysK1_1 | mdeA_2 | CLNEO_25770 | CLNEO_27300 | O-acetylserine sulfhydrylase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Methionine gamma-lyase. | 0.937 |
cysK1_1 | tdcB | CLNEO_25770 | CLNEO_20890 | O-acetylserine sulfhydrylase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | L-threonine dehydratase catabolic TdcB; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.789 |