Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KXL53072.1 | KXL53073.1 | CLNEO_16150 | CLNEO_16160 | Hypothetical protein. | Hypothetical protein; Belongs to the glycosyl hydrolase 26 family. | 0.598 |
| KXL53072.1 | luxS | CLNEO_16150 | CLNEO_16140 | Hypothetical protein. | S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.517 |
| KXL53072.1 | lysS_1 | CLNEO_16150 | CLNEO_03070 | Hypothetical protein. | lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.903 |
| KXL53072.1 | lysS_2 | CLNEO_16150 | CLNEO_04360 | Hypothetical protein. | lysine--tRNA ligase. | 0.903 |
| KXL53073.1 | KXL53072.1 | CLNEO_16160 | CLNEO_16150 | Hypothetical protein; Belongs to the glycosyl hydrolase 26 family. | Hypothetical protein. | 0.598 |
| KXL53073.1 | luxS | CLNEO_16160 | CLNEO_16140 | Hypothetical protein; Belongs to the glycosyl hydrolase 26 family. | S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.412 |
| luxS | KXL53072.1 | CLNEO_16140 | CLNEO_16150 | S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | Hypothetical protein. | 0.517 |
| luxS | KXL53073.1 | CLNEO_16140 | CLNEO_16160 | S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | Hypothetical protein; Belongs to the glycosyl hydrolase 26 family. | 0.412 |
| lysS_1 | KXL53072.1 | CLNEO_03070 | CLNEO_16150 | lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family. | Hypothetical protein. | 0.903 |
| lysS_2 | KXL53072.1 | CLNEO_04360 | CLNEO_16150 | lysine--tRNA ligase. | Hypothetical protein. | 0.903 |