STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXL53073.1Hypothetical protein; Belongs to the glycosyl hydrolase 26 family. (545 aa)    
Predicted Functional Partners:
KXL53072.1
Hypothetical protein.
       0.598
KXL54063.1
Hypothetical protein; Copper amine oxidase N-terminal domain.
  
     0.500
KXL54064.1
Hypothetical protein; Copper amine oxidase N-terminal domain.
  
     0.485
KXL53074.1
Hypothetical protein.
       0.479
KXL54517.1
Beta-monoglucosyldiacylglycerol synthase.
    
  0.455
glcK
Glucokinase.
   
 
  0.412
nagC
N-acetylglucosamine repressor.
   
 
  0.412
luxS
S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.
       0.412
KXL52826.1
Hypothetical protein; Copper amine oxidase N-terminal domain.
  
     0.409
tesA
acyl-CoA thioesterase I precursor.
    
 0.400
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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