Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXL52743.1 | KXL53042.1 | CLNEO_17650 | CLNEO_15850 | NMT1/THI5 like protein. | Hypothetical protein. | 0.548 |
KXL52743.1 | arcB_1 | CLNEO_17650 | CLNEO_17070 | NMT1/THI5 like protein. | Aerobic respiration control sensor protein ArcB. | 0.839 |
KXL52743.1 | arcB_2 | CLNEO_17650 | CLNEO_27870 | NMT1/THI5 like protein. | Aerobic respiration control sensor protein ArcB. | 0.622 |
KXL52743.1 | barA | CLNEO_17650 | CLNEO_28430 | NMT1/THI5 like protein. | Signal transduction histidine-protein kinase BarA. | 0.841 |
KXL52743.1 | cheV | CLNEO_17650 | CLNEO_06690 | NMT1/THI5 like protein. | Chemotaxis protein CheV. | 0.676 |
KXL52743.1 | ssuB_1 | CLNEO_17650 | CLNEO_01650 | NMT1/THI5 like protein. | Aliphatic sulfonates import ATP-binding protein SsuB. | 0.782 |
KXL52743.1 | ssuB_2 | CLNEO_17650 | CLNEO_16440 | NMT1/THI5 like protein. | Aliphatic sulfonates import ATP-binding protein SsuB. | 0.938 |
KXL52743.1 | ssuC_1 | CLNEO_17650 | CLNEO_01640 | NMT1/THI5 like protein. | Putative aliphatic sulfonates transport permease protein SsuC. | 0.803 |
KXL52743.1 | ssuC_2 | CLNEO_17650 | CLNEO_16430 | NMT1/THI5 like protein. | Putative aliphatic sulfonates transport permease protein SsuC. | 0.933 |
KXL52743.1 | ycdT | CLNEO_17650 | CLNEO_13800 | NMT1/THI5 like protein. | Putative diguanylate cyclase YcdT. | 0.551 |
KXL53042.1 | KXL52743.1 | CLNEO_15850 | CLNEO_17650 | Hypothetical protein. | NMT1/THI5 like protein. | 0.548 |
arcB_1 | KXL52743.1 | CLNEO_17070 | CLNEO_17650 | Aerobic respiration control sensor protein ArcB. | NMT1/THI5 like protein. | 0.839 |
arcB_1 | arcB_2 | CLNEO_17070 | CLNEO_27870 | Aerobic respiration control sensor protein ArcB. | Aerobic respiration control sensor protein ArcB. | 0.987 |
arcB_1 | barA | CLNEO_17070 | CLNEO_28430 | Aerobic respiration control sensor protein ArcB. | Signal transduction histidine-protein kinase BarA. | 0.999 |
arcB_1 | cheV | CLNEO_17070 | CLNEO_06690 | Aerobic respiration control sensor protein ArcB. | Chemotaxis protein CheV. | 0.990 |
arcB_1 | ycdT | CLNEO_17070 | CLNEO_13800 | Aerobic respiration control sensor protein ArcB. | Putative diguanylate cyclase YcdT. | 0.998 |
arcB_2 | KXL52743.1 | CLNEO_27870 | CLNEO_17650 | Aerobic respiration control sensor protein ArcB. | NMT1/THI5 like protein. | 0.622 |
arcB_2 | arcB_1 | CLNEO_27870 | CLNEO_17070 | Aerobic respiration control sensor protein ArcB. | Aerobic respiration control sensor protein ArcB. | 0.987 |
arcB_2 | barA | CLNEO_27870 | CLNEO_28430 | Aerobic respiration control sensor protein ArcB. | Signal transduction histidine-protein kinase BarA. | 0.999 |
arcB_2 | cheV | CLNEO_27870 | CLNEO_06690 | Aerobic respiration control sensor protein ArcB. | Chemotaxis protein CheV. | 0.982 |
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