STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndhI_4NAD(P)H-quinone oxidoreductase subunit I, chloroplastic. (71 aa)    
Predicted Functional Partners:
porC_2
Pyruvate synthase subunit PorC.
 
 
  0.987
korB_2
2-oxoglutarate oxidoreductase subunit KorB.
 
 
 0.981
padG_2
NADH-dependent phenylglyoxylate dehydrogenase subunit alpha.
 
 
 0.981
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.959
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.959
nifJ_3
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.959
nifJ_4
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.959
cdr_1
Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family.
    
 0.945
KXL52760.1
Hypothetical protein.
 
     0.939
padG_1
NADH-dependent phenylglyoxylate dehydrogenase subunit alpha.
 
 
 0.932
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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