STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXL52760.1Hypothetical protein. (225 aa)    
Predicted Functional Partners:
ndhI_4
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
 
     0.939
porC_2
Pyruvate synthase subunit PorC.
 
     0.910
korB_2
2-oxoglutarate oxidoreductase subunit KorB.
 
     0.879
padG_2
NADH-dependent phenylglyoxylate dehydrogenase subunit alpha.
 
     0.866
ndhI_3
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
 
     0.785
korB_1
2-oxoglutarate oxidoreductase subunit KorB.
 
     0.564
porC_1
Pyruvate synthase subunit PorC.
 
     0.517
parB_1
Putative chromosome-partitioning protein ParB; Belongs to the ParB family.
  
   0.516
noc_1
Nucleoid occlusion protein; Belongs to the ParB family.
  
   0.516
noc_2
Nucleoid occlusion protein.
  
   0.516
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.