Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| add2 | apt | CLNEO_25390 | CLNEO_20540 | Aminodeoxyfutalosine deaminase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.844 |
| add2 | deoD | CLNEO_25390 | CLNEO_00940 | Aminodeoxyfutalosine deaminase. | Purine nucleoside phosphorylase DeoD-type. | 0.904 |
| add2 | guaA | CLNEO_25390 | CLNEO_22060 | Aminodeoxyfutalosine deaminase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.830 |
| add2 | guaB | CLNEO_25390 | CLNEO_02020 | Aminodeoxyfutalosine deaminase. | Inosine-5'-monophosphate dehydrogenase. | 0.768 |
| add2 | hpt | CLNEO_25390 | CLNEO_25610 | Aminodeoxyfutalosine deaminase. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.807 |
| add2 | purB | CLNEO_25390 | CLNEO_22880 | Aminodeoxyfutalosine deaminase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.567 |
| add2 | purH | CLNEO_25390 | CLNEO_22890 | Aminodeoxyfutalosine deaminase. | Bifunctional purine biosynthesis protein PurH. | 0.514 |
| add2 | xpt | CLNEO_25390 | CLNEO_05710 | Aminodeoxyfutalosine deaminase. | Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.623 |
| apt | add2 | CLNEO_20540 | CLNEO_25390 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Aminodeoxyfutalosine deaminase. | 0.844 |
| apt | deoD | CLNEO_20540 | CLNEO_00940 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Purine nucleoside phosphorylase DeoD-type. | 0.908 |
| apt | gmk | CLNEO_20540 | CLNEO_28720 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.900 |
| apt | guaA | CLNEO_20540 | CLNEO_22060 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.988 |
| apt | guaB | CLNEO_20540 | CLNEO_02020 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Inosine-5'-monophosphate dehydrogenase. | 0.929 |
| apt | hpt | CLNEO_20540 | CLNEO_25610 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.868 |
| apt | purB | CLNEO_20540 | CLNEO_22880 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.898 |
| apt | purH | CLNEO_20540 | CLNEO_22890 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Bifunctional purine biosynthesis protein PurH. | 0.945 |
| apt | recJ | CLNEO_20540 | CLNEO_20550 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | single-stranded-DNA-specific exonuclease RecJ. | 0.842 |
| apt | xpt | CLNEO_20540 | CLNEO_05710 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.903 |
| deoD | add2 | CLNEO_00940 | CLNEO_25390 | Purine nucleoside phosphorylase DeoD-type. | Aminodeoxyfutalosine deaminase. | 0.904 |
| deoD | apt | CLNEO_00940 | CLNEO_20540 | Purine nucleoside phosphorylase DeoD-type. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.908 |
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