STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXL52649.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
KXL51969.1
Outer membrane lipoprotein carrier protein LolA.
  
    0.780
ssbA_2
Single-stranded DNA-binding protein A.
  
     0.721
KXL52394.1
Small, acid-soluble spore protein, alpha/beta type.
  
    0.685
secF
Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
       0.678
KXL51935.1
Hypothetical protein.
  
     0.667
KXL53047.1
Stage III sporulation protein AF; spore_III_AF.
  
    0.609
secD
Protein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
       0.587
lytN
Putative cell wall hydrolase LytN precursor.
  
    0.585
KXL53243.1
Hypothetical protein.
  
     0.574
KXL52446.1
HlyD family secretion protein.
  
     0.524
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.