STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bceBBacitracin export permease protein BceB. (660 aa)    
Predicted Functional Partners:
yxdL_2
ABC transporter ATP-binding protein YxdL.
 0.997
graS
Sensor histidine kinase GraS.
 
 
 0.938
graR
Response regulator protein GraR.
 
    0.826
KXL51969.1
Outer membrane lipoprotein carrier protein LolA.
   
 
 0.756
lolD_2
Lipoprotein-releasing system ATP-binding protein LolD.
  
 0.715
lolD_1
Lipoprotein-releasing system ATP-binding protein LolD.
  
 0.712
fbpC
Fe(3+) ions import ATP-binding protein FbpC.
  
 0.712
macB_2
Macrolide export ATP-binding/permease protein MacB.
  
 0.712
btuD
Vitamin B12 import ATP-binding protein BtuD.
  
 0.712
mrcA
Penicillin-binding protein 1A.
  
    0.482
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.