STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bchBLight-independent protochlorophyllide reductase subunit B. (409 aa)    
Predicted Functional Partners:
nifH1_2
Nitrogenase iron protein 1; Belongs to the NifH/BchL/ChlL family.
 
 0.979
bchN
Light-independent protochlorophyllide reductase subunit N.
 
     0.953
nifH1_1
Nitrogenase iron protein 1; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 0.901
yfmC_1
Fe(3+)-citrate-binding protein YfmC precursor.
 
     0.855
yusV_1
Putative siderophore transport system ATP-binding protein YusV.
 
     0.802
feuC
Iron-uptake system permease protein FeuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.734
fprA1
Flavo-diiron protein FprA1.
   
 
 0.732
yfiZ
Putative siderophore transport system permease protein YfiZ precursor; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.725
yesS
HTH-type transcriptional regulator YesS.
 
     0.686
nifD_1
Nitrogenase molybdenum-iron protein alpha chain.
 
     0.582
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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