STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lytNPutative cell wall hydrolase LytN precursor. (520 aa)    
Predicted Functional Partners:
KXL53049.1
SpoIIIAH-like protein.
  
  
 0.809
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.787
ssbA_2
Single-stranded DNA-binding protein A.
  
     0.763
KXL54267.1
Stage II sporulation protein P (SpoIIP).
  
     0.743
KXL54392.1
Stage II sporulation protein P (SpoIIP).
  
     0.743
guaB
Inosine-5'-monophosphate dehydrogenase.
    
  0.735
cinA
Putative competence-damage inducible protein; Belongs to the CinA family.
   
 
  0.732
cotI
Spore coat protein I.
 
   
 0.728
KXL54482.1
Putative stage IV sporulation protein YqfD.
  
     0.721
KXL54058.1
Stage II sporulation protein R; spore_II_R.
 
     0.713
Your Current Organism:
Anaerotignum neopropionicum
NCBI taxonomy Id: 36847
Other names: A. neopropionicum, Clostridium neopropionicum, DSM 3847, KCTC 15564, strain X4
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