STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fldC_1R-phenyllactate dehydratase beta subunit. (419 aa)    
Predicted Functional Partners:
fldI_1
R-phenyllactate dehydratase activator.
 0.997
fldI_3
R-phenyllactate dehydratase activator.
 
 0.776
fldI_2
R-phenyllactate dehydratase activator.
 
 0.762
hgdC
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase.
  
 0.745
acdA
acyl-CoA dehydrogenase.
    
 0.736
KPU42937.1
SirA-like protein; Belongs to the sulfur carrier protein TusA family.
 
    0.695
xdhA
Xanthine dehydrogenase molybdenum-binding subunit.
    
  0.491
ndhS
Nicotinate dehydrogenase small FeS subunit.
    
  0.491
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.481
glnB_1
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
       0.470
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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