STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPU45870.1Sodium bile acid symporter family protein. (351 aa)    
Predicted Functional Partners:
arsC1
Arsenate-mycothiol transferase ArsC1; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.957
sdpR_1
Transcriptional repressor SdpR.
 
  
 0.840
KPU45871.1
Putative permease.
  
  
 0.709
KPU45872.1
Hypothetical protein.
     
 0.688
ywlE
Low molecular weight protein-tyrosine-phosphatase YwlE.
  
  
 0.516
KPU44363.1
Hypothetical protein.
  
  
 0.516
KPU45864.1
Sodium bile acid symporter family protein.
 
    
0.490
sdpR_4
Transcriptional repressor SdpR.
  
  
 0.475
ywnH_1
Putative phosphinothricin acetyltransferase YwnH.
  
    0.444
ubiE_1
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE.
     
 0.442
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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