Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KPU45872.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
msrAB_1
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.979
msrAB_2
Peptide methionine sulfoxide reductase MsrA/MsrB.
   
 0.979
KPU45871.1
Putative permease.
 
  
 0.953
KPU44413.1
NADH oxidase.
  
 0.942
KPU43184.1
NADH oxidase.
  
 0.942
fldZ
2-enoate reductase FldZ.
  
 0.942
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.932
pdhD
Dihydrolipoyl dehydrogenase.
  
 0.908
trxB_1
Thioredoxin reductase.
  
 0.865
trxB_2
Thioredoxin reductase.
  
 0.865
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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