Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| birA | exoA | OXPF_34890 | OXPF_04450 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Exodeoxyribonuclease. | 0.920 |
| birA | guaA_1 | OXPF_34890 | OXPF_03710 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.735 |
| birA | preA | OXPF_34890 | OXPF_11120 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA. | 0.633 |
| birA | ribBA | OXPF_34890 | OXPF_21680 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.719 |
| birA | tadA_1 | OXPF_34890 | OXPF_03460 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | tRNA-specific adenosine deaminase. | 0.902 |
| exoA | birA | OXPF_04450 | OXPF_34890 | Exodeoxyribonuclease. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.920 |
| exoA | ribBA | OXPF_04450 | OXPF_21680 | Exodeoxyribonuclease. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.462 |
| exoA | tadA_1 | OXPF_04450 | OXPF_03460 | Exodeoxyribonuclease. | tRNA-specific adenosine deaminase. | 0.950 |
| guaA_1 | birA | OXPF_03710 | OXPF_34890 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.735 |
| guaA_1 | pdp | OXPF_03710 | OXPF_13530 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Pyrimidine-nucleoside phosphorylase. | 0.551 |
| guaA_1 | preA | OXPF_03710 | OXPF_11120 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA. | 0.915 |
| guaA_1 | ribBA | OXPF_03710 | OXPF_21680 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.786 |
| guaA_1 | tadA_1 | OXPF_03710 | OXPF_03460 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | tRNA-specific adenosine deaminase. | 0.611 |
| hisE | preA | OXPF_14400 | OXPF_11120 | phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA. | 0.482 |
| hisE | ribBA | OXPF_14400 | OXPF_21680 | phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.805 |
| hisE | tadA_1 | OXPF_14400 | OXPF_03460 | phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family. | tRNA-specific adenosine deaminase. | 0.917 |
| pdp | guaA_1 | OXPF_13530 | OXPF_03710 | Pyrimidine-nucleoside phosphorylase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.551 |
| pdp | ppnP | OXPF_13530 | OXPF_30030 | Pyrimidine-nucleoside phosphorylase. | Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions. | 0.901 |
| pdp | preA | OXPF_13530 | OXPF_11120 | Pyrimidine-nucleoside phosphorylase. | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA. | 0.842 |
| pdp | tadA_1 | OXPF_13530 | OXPF_03460 | Pyrimidine-nucleoside phosphorylase. | tRNA-specific adenosine deaminase. | 0.715 |
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