Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KPU44557.1 | gltB_2 | OXPF_16400 | OXPF_35700 | Blue-light-activated protein. | Ferredoxin-dependent glutamate synthase 1. | 0.617 |
| KPU44557.1 | rho | OXPF_16400 | OXPF_16890 | Blue-light-activated protein. | Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.649 |
| KPU44557.1 | tolB_1 | OXPF_16400 | OXPF_03870 | Blue-light-activated protein. | Protein TolB. | 0.801 |
| KPU44557.1 | zraS | OXPF_16400 | OXPF_30830 | Blue-light-activated protein. | Sensor protein ZraS. | 0.997 |
| KPU45046.1 | tolB_1 | OXPF_15240 | OXPF_03870 | Hypothetical protein. | Protein TolB. | 0.609 |
| KPU45046.1 | vgb | OXPF_15240 | OXPF_40050 | Hypothetical protein. | Virginiamycin B lyase. | 0.665 |
| KPU45786.1 | tolB_1 | OXPF_10220 | OXPF_03870 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Protein TolB. | 0.448 |
| gltB_2 | KPU44557.1 | OXPF_35700 | OXPF_16400 | Ferredoxin-dependent glutamate synthase 1. | Blue-light-activated protein. | 0.617 |
| gltB_2 | rho | OXPF_35700 | OXPF_16890 | Ferredoxin-dependent glutamate synthase 1. | Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.636 |
| gltB_2 | tolB_1 | OXPF_35700 | OXPF_03870 | Ferredoxin-dependent glutamate synthase 1. | Protein TolB. | 0.758 |
| gltB_2 | vgb | OXPF_35700 | OXPF_40050 | Ferredoxin-dependent glutamate synthase 1. | Virginiamycin B lyase. | 0.868 |
| gltB_2 | zraS | OXPF_35700 | OXPF_30830 | Ferredoxin-dependent glutamate synthase 1. | Sensor protein ZraS. | 0.754 |
| manA | tolB_1 | OXPF_11450 | OXPF_03870 | Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family. | Protein TolB. | 0.439 |
| mutL | tolB_1 | OXPF_13220 | OXPF_03870 | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | Protein TolB. | 0.544 |
| mutL | zraS | OXPF_13220 | OXPF_30830 | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | Sensor protein ZraS. | 0.428 |
| rho | KPU44557.1 | OXPF_16890 | OXPF_16400 | Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Blue-light-activated protein. | 0.649 |
| rho | gltB_2 | OXPF_16890 | OXPF_35700 | Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Ferredoxin-dependent glutamate synthase 1. | 0.636 |
| rho | tolB_1 | OXPF_16890 | OXPF_03870 | Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Protein TolB. | 0.564 |
| rho | zraS | OXPF_16890 | OXPF_30830 | Hypothetical protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Sensor protein ZraS. | 0.572 |
| surE | tolB_1 | OXPF_13400 | OXPF_03870 | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Protein TolB. | 0.464 |
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