STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPU45938.1Hypothetical protein. (379 aa)    
Predicted Functional Partners:
KPU45936.1
Hypothetical protein.
 
    0.941
bchI_2
Magnesium-chelatase 38 kDa subunit.
  
 
 0.713
KPU45937.1
Hypothetical protein.
       0.701
KPU42147.1
Hypothetical protein.
  
     0.631
KPU42148.1
Hypothetical protein.
  
     0.617
mtnW
2,3-diketo-5-methylthiopentyl-1-phosphate enolase.
 
   
 0.593
pcrA_2
ATP-dependent DNA helicase PcrA.
       0.485
KPU43395.1
NAD-dependent malic enzyme.
  
    0.477
speA_1
Arginine decarboxylase.
   
 
 0.420
speA_2
Arginine decarboxylase.
   
 
 0.420
Your Current Organism:
Oxobacter pfennigii
NCBI taxonomy Id: 36849
Other names: ATCC 43583, Clostridium pfennigii, DSM 3222, O. pfennigii, strain V5-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.